Ligaza — разлика између измена

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U [[biochemistry|biohemiji]], '''ligaza''' je [[enzim]] koji može da [[catalyze|katalizuje]] spajanje dva velika molekula puretem formiranja nove [[chemical bond|hemijske veze]], što obično prati [[hydrolysis|hidroliza]] male krajnje hemijske grupe na jednom od većih molekula ili enzim katalizuje povezivanje dva jedinjenja, e.g., enzimi kiji katalizuju spajanje -{C-O}-, -{C-S}-, -{C-N}-, etc. Generalno, ligaze katalizuju sledeću reakciju:
{{rut}}
 
: -{Ab + C → A–C + b}-
In [[biochemistry]], a '''ligase''' is an [[enzyme]] that can [[catalyze]] the joining of two large molecules by forming a new [[chemical bond]], usually with accompanying [[hydrolysis]] of a small pendant chemical group on one of the larger molecules or the enzyme catalyzing the linking together of two compounds, e.g., enzymes that catalyze joining of C-O, C-S, C-N, etc. In general, a ligase catalyzes the following reaction:
 
ili ponekad
:Ab + C → A–C + b
 
: -{Ab + cD → A–D + b + c + d + e + f}-
or sometimes
 
pri čemu mala slova mogu da označavaju male, nezavisne grupe. Ligaze mogu da spoje dva komplementarna fragmenta nukleinske kiseline i poprave jednolančane prekide koji nastaju u dvolančanoj DNK tokom replikacije.
:Ab + cD → A–D + b + c + d + e + f
 
== Nomenklatura ==
where the lowercase letters can signify the small, dependent groups. Ligase can join two complementary fragments of nucleic acid and repair single stranded breaks that arise in double stranded DNA during replication.
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==Nomenclature==
The common names of ligases often include the word "ligase", such as [[DNA ligase]], an enzyme commonly used in molecular biology [[laboratory|laboratories]] to join together [[DNA]] fragments. Other common names for ligases include the word "synthetase", because they are used to [[biosynthesis|synthesize]] new molecules.
 
Biochemical nomenclature has sometimes distinguished synthetases from [[synthase]]s and sometimes treated the words as [[synonym]]s. Under one definition, synthases ''do not'' use energy from [[nucleoside triphosphate]]s (such as ATP, GTP, CTP, TTP, and UTP), whereas synthetases ''do'' use nucleoside triphosphates. It is also said that a synthase is a [[lyase]] (a lyase is an enzyme that catalyzes the breaking of various chemical bonds by means other than hydrolysis and oxidation, often forming a new double bond or a new ring structure) and does not require any energy, whereas a synthetase is a ligase (a ligase is an enzyme that binds two chemicals or compounds) and thus requires energy. However, the [[Joint Commission on Biochemical Nomenclature]] (JCBN) dictates that "synthase" can be used with any enzyme that catalyses synthesis (whether or not it uses nucleoside triphosphates), whereas "synthetase" is to be used synonymously.<ref>{{cite web|url=http://www.chem.qmul.ac.uk/iubmb/newsletter/misc/synthase.html |title=Synthases and ligases |work=chem.qmul.ac.uk |date= |accessdate=July 28, 2013}}</ref>
 
==Classification Klasifikacija ==
LigasesLigagaze arese classifiedklasifikuju askao '''EC 6''' in theu [[Enzyme Commission number|EC numberbrojevnoj]] classification ofklasifikaciji enzymesenzima. LigasesLigaze canse bemogud furtherdalje classifiedklasifikovati intou sixšest subclassespodklasa:
 
*[[:Category:EC 6.1|EC 6.1]] includesobuhvata ligasesligaze usedkoje tose formkoriste carbonza formiranje ugljenik-oxygenkiseonik bondsveza
*[[:Category:EC 6.2|EC 6.2]] includesobuhvata ligasesligaze usedkoje tose formkoriste carbonza formiranje ugljenik-sulfursumpor bondsveza
*[[:Category:EC 6.3|EC 6.3]] includesobuhvata ligasesligaze usedkoje tose formkoriste carbonza formiranje ugljenik-nitrogenazot bondsveza (includinguključujući [[argininosuccinate synthetase|argininosukcinatnu sintazu]])
*[[:Category:EC 6.4|EC 6.4]] includesobuhvata ligasesligaze usedkoje tose formkoriste carbonza formiranje ugljenik-carbonugljenik bondsveza
*[[:Category:EC 6.5|EC 6.5]] includesobuhvata ligasesligaze usedkoje tose formkoriste za formiranje [[phosphoricEstar|fosforno esterestarskih]] bondsveza
*[[:Category:EC 6.6|EC 6.6]] includesobuhvata ligasesligaze usedkoje tose formkoriste nitrogenza formiranje azot-metal bondsveza, as inkao theu [[chelatase|helatazama]]s
 
== Lizaze asocirane sa membranom ==
==Membrane-associated ligases==
Some ligases associate with [[biological membranes]] as [[peripheral membrane protein]]s or anchored through a single [[transmembrane helix]]<ref>[http://membranome.org/protein_classes/14 Superfamilies of single-pass transmembrane ligases] in [[Membranome database]]</ref>, for example certain [[ubiquitin ligase]] related proteins.
 
SomePojedine ligasesligaze associatesu withpovezane sa [[biological membranes|biološkim membranama]] askao [[peripheral membrane protein|periferni membranski proteini]]s orili anchoredusidrene throughpomoću a singlejednog [[transmembrane helix|transmembranskog heliksa]]<ref>[http://membranome.org/protein_classes/14 Superfamilies of single-pass transmembrane ligases] in [[Membranome database]]</ref>, forna exampleprimer certainpojedine [[ubiquitin ligase|ubikvitinske ligaze]] related proteins.
==Etymology and pronunciation==
The word ''ligase'' uses [[classical compound|combining forms]] of ''[[wikt:lig-#Prefix|lig-]]'' (from the [[Latin language|Latin]] verb ''ligāre'', "to bind" or "to tie together") + ''[[wikt:-ase#Suffix|-ase]]'' (denoting an enzyme), yielding "binding enzyme".
 
==See alsoVidi još ==
* [[DNK ligaza]]
{{Portal|Chemistry}}
*[[DNA ligase]]
 
== Reference ==
{{reflist}}
* [http://www.chem.qmul.ac.uk/iubmb/enzyme/EC6/intro.html EC 6 Introduction] from the Department of Chemistry at [[Queen Mary, University of London]]
 
== Spoljašnje veze ==
{{Enzymes}}
{{Commons category-lat|Ligase}}
{{Ligases}}
* -{[http://www.chem.qmul.ac.uk/iubmb/enzyme/EC6/intro.html EC 6 Introduction] from the Department of Chemistry at [[Queen Mary, University of London]]}-
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[[Категорија:Лигазе| ]]
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Преузето из „https://sr.wikipedia.org/wiki/Ligaza